pyrox.dev
1{
2 lib,
3 buildPythonPackage,
4 fetchFromGitHub,
5
6 # build-system
7 setuptools,
8
9 # dependencies
10 autograd,
11 future,
12 numba,
13 numpy,
14 pandas,
15 patsy,
16 scikit-learn,
17 scipy,
18 statsmodels,
19
20 # tests
21 matplotlib,
22 pytest-xdist,
23 pytestCheckHook,
24 seaborn,
25}:
26
27buildPythonPackage rec {
28 pname = "hyppo";
29 version = "0.5.2";
30 pyproject = true;
31
32 src = fetchFromGitHub {
33 owner = "neurodata";
34 repo = "hyppo";
35 tag = "v${version}";
36 hash = "sha256-7Y+UhneIGwqjsPCnGAQWF/l4r1gFbYs3fdHhV46ZBjA=";
37 };
38
39 # some of the doctests (4/21) are broken, e.g. unbound variables, nondeterministic with insufficient tolerance, etc.
40 # (note upstream's .circleci/config.yml only tests test_*.py files despite their pytest.ini adding --doctest-modules)
41 postPatch = ''
42 substituteInPlace pytest.ini --replace-fail "addopts = --doctest-modules" ""
43 '';
44
45 build-system = [ setuptools ];
46
47 dependencies = [
48 autograd
49 future
50 numba
51 numpy
52 pandas
53 patsy
54 scikit-learn
55 scipy
56 statsmodels
57 ];
58
59 nativeCheckInputs = [
60 pytest-xdist
61 pytestCheckHook
62 matplotlib
63 seaborn
64 ];
65 enabledTestPaths = [
66 "hyppo"
67 ];
68
69 meta = {
70 homepage = "https://github.com/neurodata/hyppo";
71 description = "Python package for multivariate hypothesis testing";
72 changelog = "https://github.com/neurodata/hyppo/releases/tag/v${version}";
73 license = lib.licenses.mit;
74 maintainers = with lib.maintainers; [ bcdarwin ];
75 };
76}