pyrox.dev
1{
2 lib,
3 buildPythonPackage,
4 fetchFromGitHub,
5 setuptools,
6 matplotlib,
7 pydicom,
8 python-dateutil,
9 pytestCheckHook,
10 versionCheckHook,
11}:
12
13let
14 deid-data = buildPythonPackage {
15 pname = "deid-data";
16 version = "unstable-2022-12-06";
17 pyproject = true;
18
19 build-system = [ setuptools ];
20
21 dependencies = [ pydicom ];
22
23 src = fetchFromGitHub {
24 owner = "pydicom";
25 repo = "deid-data";
26 rev = "5750d25a5048fba429b857c16bf48b0139759644";
27 hash = "sha256-c8NBAN53NyF9dPB7txqYtM0ac0Y+Ch06fMA1LrIUkbc=";
28 };
29
30 meta = {
31 description = "Supplementary data for deid package";
32 homepage = "https://github.com/pydicom/deid-data";
33 license = lib.licenses.mit;
34 maintainers = [ lib.maintainers.bcdarwin ];
35 };
36 };
37in
38buildPythonPackage rec {
39 pname = "deid";
40 version = "0.4.6";
41 pyproject = true;
42
43 # Pypi version has no tests
44 src = fetchFromGitHub {
45 owner = "pydicom";
46 repo = "deid";
47 # the github repo does not contain Pypi version tags:
48 rev = "f2e125e5a13ae1c3ccfeb55d9431d3a627a4d0db";
49 hash = "sha256-Vk6MD3MNf1JejqACxjjHkFniK7YDgmdH7k1iQi+enEY=";
50 };
51
52 build-system = [ setuptools ];
53
54 dependencies = [
55 matplotlib
56 pydicom
57 python-dateutil
58 ];
59
60 nativeCheckInputs = [
61 deid-data
62 pytestCheckHook
63 versionCheckHook
64 ];
65 versionCheckProgramArg = "--version";
66
67 pythonImportsCheck = [ "deid" ];
68
69 meta = {
70 description = "Best-effort anonymization for medical images";
71 mainProgram = "deid";
72 changelog = "https://github.com/pydicom/deid/blob/${src.rev}/CHANGELOG.md";
73 homepage = "https://pydicom.github.io/deid";
74 license = lib.licenses.mit;
75 maintainers = with lib.maintainers; [ bcdarwin ];
76 };
77}