1{
2 lib,
3 buildPythonPackage,
4 fetchFromGitHub,
5 imageio,
6 numpy,
7 pytestCheckHook,
8 pythonOlder,
9 scikit-image,
10 slicerator,
11}:
12
13buildPythonPackage rec {
14 pname = "pims";
15 version = "0.7";
16 format = "setuptools";
17
18 disabled = pythonOlder "3.7";
19
20 src = fetchFromGitHub {
21 owner = "soft-matter";
22 repo = "pims";
23 tag = "v${version}";
24 hash = "sha256-3SBZk11w6eTZFmETMRJaYncxY38CYne1KzoF5oRgzuY=";
25 };
26
27 propagatedBuildInputs = [
28 slicerator
29 imageio
30 numpy
31 ];
32
33 nativeCheckInputs = [
34 pytestCheckHook
35 scikit-image
36 ];
37
38 pythonImportsCheck = [ "pims" ];
39
40 pytestFlags = [
41 "-Wignore::Warning"
42 ];
43
44 disabledTests = [
45 # NotImplementedError: Do not know how to deal with infinite readers
46 "TestVideo_ImageIO"
47 ];
48
49 disabledTestPaths = [
50 # AssertionError: Tuples differ: (377, 505, 4) != (384, 512, 4)
51 "pims/tests/test_display.py"
52 ];
53
54 meta = with lib; {
55 description = "Module to load video and sequential images in various formats";
56 homepage = "https://github.com/soft-matter/pims";
57 changelog = "https://github.com/soft-matter/pims/releases/tag/v${version}";
58 license = licenses.bsd3;
59 maintainers = [ ];
60 };
61}