pyrox.dev
1{
2 lib,
3 fetchPypi,
4 buildPythonPackage,
5 pythonOlder,
6 setuptools-scm,
7 pytestCheckHook,
8}:
9
10buildPythonPackage rec {
11 pname = "screed";
12 version = "1.1.3";
13 format = "setuptools";
14 disabled = pythonOlder "3.8";
15
16 src = fetchPypi {
17 inherit pname version;
18 hash = "sha256-N+gWl8fbqVoFNVTltahq/zKXBeHPXfxee42lht7gcrg=";
19 };
20
21 nativeBuildInputs = [ setuptools-scm ];
22
23 pythonImportsCheck = [ "screed" ];
24 checkInputs = [ pytestCheckHook ];
25
26 # These tests use the screed CLI and make assumptions on how screed is
27 # installed that break with nix. Can be enabled when upstream is fixed.
28 disabledTests = [
29 "Test_convert_shell"
30 "Test_fa_shell_command"
31 "Test_fq_shell_command"
32 ];
33
34 meta = with lib; {
35 description = "Simple read-only sequence database, designed for short reads";
36 mainProgram = "screed";
37 homepage = "https://pypi.org/project/screed/";
38 maintainers = with maintainers; [ luizirber ];
39 license = licenses.bsd3;
40 };
41}