commit 47b6f6fda67355a98b6d23cf67b446921e143732 · anil.recoil.org/opam-repository

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packages/bistro-bio/bistro-bio.0.6.0/opam

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       opam-version: "2.0"

     

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       synopsis: "Bistro workflows for computational biology"

     

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       description: """

     

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       This library provides wrappers for popular tools for genomics, transcriptomics

     

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       and phylogeny, as well as custom tools to help piping data from one tool to the

     

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       other.

     

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       """

     

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       maintainer: ["philippe.veber@gmail.com"]

     

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       authors: ["Philippe Veber"]

     

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       license: "CeCILL-B"

     

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       homepage: "https://github.com/pveber/bistro/"

     

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       bug-reports: "https://github.com/pveber/bistro/issues"

     

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       depends: [

     

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         "dune" {>= "1.11"}

     

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         "biocaml"

     

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         "biotk"

     

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         "tyxml"

     

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         "bistro"

     

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       ]

     

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       build: [

     

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         ["dune" "subst"] {dev}

     

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         [

     

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           "dune"

     

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           "build"

     

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           "-p"

     

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           name

     

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           "-j"

     

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           jobs

     

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           "@install"

     

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           "@runtest" {with-test}

     

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           "@doc" {with-doc}

     

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         ]

     

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       ]

     

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       dev-repo: "git+https://github.com/pveber/bistro.git"

     

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       url {

     

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         src:

     

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           "https://github.com/pveber/bistro/releases/download/v0.6.0/bistro-0.6.0.tbz"

     

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         checksum: [

     

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           "sha256=146177faaaa9117a8e2bf0fd60cb658662c0aa992f35beb246e6fd0766050e66"

     

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           "sha512=553fe0c20f236316449b077a47e6e12626d193ba1916e9da233e5526dd39090e8677277e1c79baace3bdc940cb009f25431730a8efc00ae4ed9cc42a0add9609"

     

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         ]

     

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       }

     

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       x-commit-hash: "953ce0ac42a90ca11e953b9859abb51c0d074d2c"

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packages/bistro/bistro.0.6.0/opam

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       opam-version: "2.0"

     

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       synopsis: "A library to build and run distributed scientific workflows"

     

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       description: """

     

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       bistro is an OCaml library to build and run computations represented

     

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       by a collection of interdependent scripts or OCaml functions, as is

     

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       often found in data analysis.

     

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       Features:

     

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       - build complex and composable workflows declaratively

     

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       - simple and lightweight wrapping of new components

     

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       - resume-on-failure: if something fails, fix it and the workflow will

     

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         restart from where it stopped

     

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       - parallel workflow execution

     

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       - development-friendly: when a script is modified, bistro

     

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         automatically finds out what needs to be recomputed

     

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       - automatic naming of generated files

     

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       - static typing: detect file format errors at compile time

     

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       """

     

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       maintainer: ["philippe.veber@gmail.com"]

     

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       authors: ["Philippe Veber"]

     

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       license: "CeCILL-B"

     

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       homepage: "https://github.com/pveber/bistro/"

     

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       bug-reports: "https://github.com/pveber/bistro/issues"

     

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       depends: [

     

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         "base64" {>= "3.0.0"}

     

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         "bos"

     

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         "dune" {> "1.11"}

     

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         "core" {>= "0.12.0"}

     

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         "lwt" {>= "3.2.0"}

     

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         "lwt_react"

     

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         "ocamlgraph" {>= "1.8.7"}

     

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         "ocaml" {>= "4.08.0"}

     

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         "ppxlib" {>= "0.23.0"}

     

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         "ppx_sexp_conv"

     

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         "rresult"

     

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         "sexplib" {>= "113.24.00"}

     

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         "tyxml" {>= "4.3.0"}

     

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       ]

     

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       build: [

     

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         ["dune" "subst"] {dev}

     

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         [

     

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           "dune"

     

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           "build"

     

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           "-p"

     

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           name

     

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           "-j"

     

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           jobs

     

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           "@install"

     

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           "@runtest" {with-test}

     

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           "@doc" {with-doc}

     

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         ]

     

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       ]

     

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       dev-repo: "git+https://github.com/pveber/bistro.git"

     

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       url {

     

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         src:

     

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           "https://github.com/pveber/bistro/releases/download/v0.6.0/bistro-0.6.0.tbz"

     

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         checksum: [

     

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           "sha256=146177faaaa9117a8e2bf0fd60cb658662c0aa992f35beb246e6fd0766050e66"

     

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           "sha512=553fe0c20f236316449b077a47e6e12626d193ba1916e9da233e5526dd39090e8677277e1c79baace3bdc940cb009f25431730a8efc00ae4ed9cc42a0add9609"

     

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         ]

     

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       }

     

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       x-commit-hash: "953ce0ac42a90ca11e953b9859abb51c0d074d2c"