commit cb2f0d3aab34ef3a83410dcca72a927220bcc74b · pyrox.dev/nixpkgs

+33 -7

pkgs/applications/science/chemistry/pymol/default.nix

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       { stdenv, fetchurl, python27Packages, glew, freeglut, libpng, libxml2, tk, freetype }:

     

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       { stdenv, fetchurl, makeDesktopItem

     

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       , python3, python3Packages

     

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       , glew, freeglut, libpng, libxml2, tk, freetype }:

     

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       with stdenv.lib;

     

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       let

     

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         version = "1.8.4.0";

     

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         pname = "pymol";

     

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         ver_maj = "1.8";

     

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         ver_min = "4";

     

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         version = "${ver_maj}.${ver_min}.0";

     

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         description = "A Python-enhanced molecular graphics tool";

     

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         desktopItem = makeDesktopItem {

     

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           name = "${pname}";

     

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           exec = "${pname}";

     

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           desktopName = "PyMol Molecular Graphics System";

     

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           genericName = "Molecular Modeller";

     

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           comment = description;

     

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           mimeType = "chemical/x-pdb;chemical/x-mdl-molfile;chemical/x-mol2;chemical/seq-aa-fasta;chemical/seq-na-fasta;chemical/x-xyz;chemical/x-mdl-sdf;";

     

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           categories = "Graphics;Education;Science;Chemistry;";

     

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         };

     

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       in

     

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       python27Packages.buildPythonApplication {

     

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       python3Packages.buildPythonApplication {

     

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         name = "pymol-${version}";

     

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         src = fetchurl {

     

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           url = "mirror://sourceforge/project/pymol/pymol/1.8/pymol-v1.8.4.0.tar.bz2";

     

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           url = "mirror://sourceforge/project/pymol/pymol/${ver_maj}/pymol-v${version}.tar.bz2";

     

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           sha256 = "0yfj8g5yic9zz6f0bw2n8h6ifvgsn8qvhq84alixsi28wzppn55n";

     

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         };

     

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         buildInputs = [ python27Packages.numpy glew freeglut libpng libxml2 tk freetype ];

     

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         buildInputs = [ python3Packages.numpy glew freeglut libpng libxml2 tk freetype ];

     

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         NIX_CFLAGS_COMPILE = "-I ${libxml2.dev}/include/libxml2";

     

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         installPhase = ''

     

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           python setup.py install --home=$out

     

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           cp -r ${desktopItem}/share/ $out/

     

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           runHook postInstall

     

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         '';

     

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         meta = with stdenv.lib; {

     

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           description = "A Python-enhanced molecular graphics tool";

     

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         postInstall = with python3Packages; ''

     

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           wrapProgram $out/bin/pymol \

     

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             --prefix PYTHONPATH : ${makeSearchPathOutput "lib" python3.sitePackages [ Pmw tkinter ]}

     

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         '';

     

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         meta = {

     

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           description = description;

     

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           homepage = "https://www.pymol.org/";

     

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           license = licenses.psfl;

     

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         };

+24

pkgs/development/python-modules/Pmw/default.nix

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       { lib , buildPythonPackage , fetchPypi, tkinter }:

     

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       buildPythonPackage rec {

     

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         pname = "Pmw";

     

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         version = "2.0.1";

     

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         name = "${pname}-${version}";

     

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         src = fetchPypi {

     

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           inherit pname version;

     

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           sha256 = "080iml3868nxniyn56kcwnbghm10j7fw74a5nj0s19sm4zsji78b";

     

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         };

     

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         propagatedBuildInputs = [ tkinter ];

     

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         # Disable tests due to their xserver requirement

     

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         doCheck = false;

     

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         meta = {

     

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           description = "A toolkit for building high-level compound widgets in Python using the Tkinter module";

     

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           homepage = "http://pmw.sourceforge.net/";

     

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           license = lib.licenses.mit;

     

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           maintainers = with lib.maintainers; [ mounium ];

     

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         };

     

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       }

pkgs/top-level/python-packages.nix

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         plantuml = callPackage ../tools/misc/plantuml { };

     

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         Pmw = callPackage ../development/python-modules/Pmw { };

     

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         pyaes = callPackage ../development/python-modules/pyaes.nix { };

     

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         pyatspi = if isPy3k then callPackage ../development/python-modules/pyatspi { } else throw "pyatspi not supported for interpreter ${python.executable}";